Plant Disease Identification Using Convulutional Neural Network

Analyze your RNA sequencing data without writing a single line of code

Reproducible bioinformatics pipelines in python. Import any Unix tool/command in python.

is an open-source LIMS (laboratory Information Management System) for Next Generation Sequencing sample management, statistics and reports, and bioinformatics analysis service management.

Structural Bioinformatics is awesome. Throw your textbook in the garbage, light the garbage can on fire, and blend the ashes into your cold brew almond milk latte and read this.

Natural Language Search and Analysis of High Dimensional Genomic Data

A suite of tools to explore protein structures with Protein Blocks 🐍

programs and scripts, mainly python, for analyses related to nucleic or protein sequences

Explore biomolecular pathways in Reactome from the command-line or a Python script

A python project for analysis of codon usage for gene or genome analysis

Python code to extract features from Protein sequences for Machine Learning/Deep Learning

🐍 Snakemake wrappers for bioinformatics.

pMoSS (p-value Model using the Sample Size) is a Python code to model the p-value as an n-dependent function using Monte Carlo cross-validation. Exploits the dependence on the sample size to characterize the differences among groups of large datasets

Python Library for data analysis based on GMQL

Searching for Horizontal Gene Transfer

A collection of Python modules equivalent to R ReQTL Toolkit aims to identify the association between expressed SNVs with their gene expression using RNA-sequencing data.

Quality control plotting for long reads

CoNSEnsX - Complience of NMR-derived Structural Ensembles with Experimental Data

Find motifs enriched around prominent crosslinks

Tool for similarity analysis of protein function annotations.